Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787256.1_cds_XP_016503286.1_18
CDS Infomation

[gene=LOC107821084] [db_xref=GeneID:107821084] [protein=phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like] [protein_id=XP_016503286.1] [location=join(56294..56833,57664..57941,58104..58380,59106..59351,59863..60114)] [gbkey=CDS]
Sequence

ATGGCTCTGACAGACGCCGCCGCCACCAGCAGCAGAGGTGGCTCAGCTCTCCCCAATTCA
TGCCTTCAAACCCCAAAGCTTTCACCTTTACAAAAAACCACCTCCATCTATTCCTTCCCC
ACCACCACAGCCACCCCATCAAACTCCAAAATCAAGCCAAGAATTAATAAACCAATCTCA
GCCGTTCAATCTCCACCTTCAACAACAACAAAAACTGCTCAAAACCCAGATGGAAAATGG
AGTCTTGAAAGCTGGAAGTTAAAACCAGCTTTTCAGCTACCTGAGTACCCTGATAAAGTT
GAGCTGGAATCAGTTCTTAAGACCCTTTCAACTTATCCTCCAATTGTATTTGCTGGCGAA
GCTAGGAATCTTGAAGAGAAATTGGGAGAAGCAGCTCTTGGAAATGCTTTCTTGTTGCAA
GGGGGTGATTGTGCTGAGAGTTTTAAGGAGTTTAGTGCTAATAACATTAGGGACACTTTT
AGAGTCATATTGCAGATGGGAGTTGTGCTTATGTTTGGTGGTCAAATGCCTGTTATCAAG
GTGGGTAGAATGGCAGGTCAATTTGCGAAGCCAAGATCTGATCCGTTTGAAGAGAAGGAT
GGCGTGAAGCTGCCAAGTTACAGGGGAGACAATGTGAATGGTGACGCCTTTGATGAGAAA
TCAAGACTTCCTGACCCCCATAGGATGATTAGGGCATACACTCAATCTGTAGCTACCTTG
AACCTCCTCCGAGCATTTGCTACAGGGGGGTATGCTGCCATGCAGAGGGTTAACCAGTGG
AATCTCGACTTTACTGATCACAGCGAGCAAGGTGACAGGTACCGCGAACTGGCTCACCGA
GTAGACGAAGCCATGGGCTTCATGAGTGCTGCTGGGATTACAGTTGACCACCCAATCATG
ACTACAACAGACTTCTGGACATCCCACGAGTGCCTTCTCTTGCCTTATGAACAAGCACTT
ACGAGGGAGGATTCAACTTCTGGCCTTTATTATGACTGCTCCGCTCATATGATTTGGGTT
GGGGAACGAACAAGGCAATTGGACGGTGCTCATGTTGAGTTCCTGAGAGGAATTGCCAAT
CCACTTGGTATCAAGGTGAGTCAGAAAATGGATCCAGATGAACTAGTCAAGCTTACTGAC
ATTCTTAACCCTCAAAATAGACCAGGAAGAATTACAGTGATCGCCAGGATGGGAGCTGAT
AACATGAGAGTAAAGCTTCCCCATCTGATCAGGGCTGTTCGCGGAGCAGGTCAAATTGTC
ACTTGGGTCAGTGATCCTATGCATGGAAATACCACCAAAGCCCCCTGTGGACTCAAAACG
CGTTCATTTGACTCTATCCGGGCTGAACTAAGAGCATTCTTTGATGTACACGATCAAGAA
GGGAGCTATCCTGGGGGCGTGCATCTGGAGATGACAGGCCAGAATGTAACGGAGTGCGTG
GGAGGCTCTCGGACAGTTACTTACAATGATCTAAGCTCGCGCTACCATACACATTGTGAC
CCAAGACTTAATGCTTCTCAAGCACTTGAACTCGCCTTTCTTATTGCCGAGCGCCTCAGG
AAAAGAAGACTGGGACCAAAGTTCAGGCTCTAG

Peptide Sequence

PEP ID

XP_016503286.1
PEP Infomation

PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MALTDAAATSSRGGSALPNSCLQTPKLSPLQKTTSIYSFPTTTATPSNSKIKPRINKPIS
AVQSPPSTTTKTAQNPDGKWSLESWKLKPAFQLPEYPDKVELESVLKTLSTYPPIVFAGE
ARNLEEKLGEAALGNAFLLQGGDCAESFKEFSANNIRDTFRVILQMGVVLMFGGQMPVIK
VGRMAGQFAKPRSDPFEEKDGVKLPSYRGDNVNGDAFDEKSRLPDPHRMIRAYTQSVATL
NLLRAFATGGYAAMQRVNQWNLDFTDHSEQGDRYRELAHRVDEAMGFMSAAGITVDHPIM
TTTDFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMIWVGERTRQLDGAHVEFLRGIAN
PLGIKVSQKMDPDELVKLTDILNPQNRPGRITVIARMGADNMRVKLPHLIRAVRGAGQIV
TWVSDPMHGNTTKAPCGLKTRSFDSIRAELRAFFDVHDQEGSYPGGVHLEMTGQNVTECV
GGSRTVTYNDLSSRYHTHCDPRLNASQALELAFLIAERLRKRRLGPKFRL

Transcript Sequence

Gene sequence data has not been registered.